------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3157 1k3i_A) ( 387 1bhg_A) 0.8859 0.8859 6.1651 ( 0 18 28) 0 0.8859 0.8859 9 9 ( 3157 1k3i_A) ( 607 1ciy ) 0.8855 0.7980 6.3468 ( 0 18 28) 0 0.8855 0.7980 9 10 ( 3157 1k3i_A) ( 700 1cx1_A) 0.8885 0.7998 3.6847 ( 0 18 28) 0 0.8885 0.7998 9 10 ( 3157 1k3i_A) ( 765 1d7p_M) 0.8783 0.6137 3.3912 ( 1 19 28) 0 0.8783 0.6137 9 13 ( 3157 1k3i_A) ( 1271 1eut ) 0.9999 0.9999 1.8749 ( 0 26 36) 0 0.9999 0.9999 9 9 ( 3157 1k3i_A) ( 1884 1gny_A) 0.6663 0.4615 5.0633 ( 0 9 15) 0 0.8880 0.6152 9 13 ( 3157 1k3i_A) ( 1918 1gqp_A) 0.7770 0.4666 5.1423 ( 0 9 21) 0 0.9881 0.5990 9 15 ( 3157 1k3i_A) ( 1954 1gu3_A) 0.8875 0.8875 5.0218 ( 0 12 28) 0 0.8875 0.8875 9 9 ( 3157 1k3i_A) ( 1959 1gui_A) 0.8875 0.7268 5.0461 ( 0 13 28) 0 0.8875 0.7268 9 11 ( 3157 1k3i_A) ( 1989 1gwm_A) 0.8879 0.7269 4.6471 ( 0 12 28) 0 0.8879 0.7269 9 11 ( 3157 1k3i_A) ( 2116 1h6y_A) 0.7774 0.5833 4.1694 ( 0 6 21) 0 0.8872 0.6663 9 12 ( 3157 1k3i_A) ( 2241 1hn0_A) 0.7754 0.5828 6.8284 ( 0 11 21) 0 0.9733 0.7434 9 12 ( 3157 1k3i_A) ( 2408 1i5p_A) 0.8871 0.6662 5.3905 ( 0 15 28) 0 0.8871 0.6662 9 12 ( 3157 1k3i_A) ( 2762 1j83_A) 0.8866 0.7986 5.7428 ( 0 17 28) 0 0.8866 0.7986 9 10 ( 3157 1k3i_A) ( 2872 1jhj_A) 0.9899 0.6417 4.4223 ( 1 23 36) 0 0.9964 0.6425 9 14 ( 3157 1k3i_A) ( 2886 1ji6_A) 0.6665 0.5999 4.1458 ( 0 8 15) 0 0.6665 0.5999 9 10 ( 3157 1k3i_A) ( 3063 1ju3_A) 0.5549 0.3845 7.5690 ( 0 4 10) 0 0.7324 0.6186 9 13 ( 3157 1k3i_A) ( 3098 1jz7_A) 0.8874 0.4705 5.1449 ( 0 17 28) 0 0.8874 0.4705 9 17 ( 3157 1k3i_A) ( 3124 1k12_A) 0.9273 0.6790 3.4652 ( 2 26 36) 0 0.9273 0.6790 9 13 ( 3157 1k3i_A) ( 3157 1k3i_A) 1.0000 1.0000 0.0000 ( 0 26 36) 0 1.0000 1.0000 9 9 ( 3157 1k3i_A) ( 3170 1k45_A) 0.7772 0.6362 4.7674 ( 0 9 21) 0 0.9748 0.8086 9 11 ( 3157 1k3i_A) ( 3280 1kex_A) 0.8782 0.7936 3.6508 ( 1 19 28) 0 0.8782 0.7936 9 10 ( 3157 1k3i_A) ( 3297 1kgy_A) 0.8869 0.7988 5.5497 ( 0 15 28) 0 0.8869 0.7988 9 10 ( 3157 1k3i_A) ( 3562 1l7l_A) 0.7767 0.9964 5.5586 ( 0 5 21) 0 0.7767 0.9964 9 7 ( 3157 1k3i_A) ( 3680 1lns_A) 0.9858 0.4733 6.8270 ( 1 25 36) 0 0.9858 0.4733 9 19 ( 3157 1k3i_A) ( 4423 1nx9_A) 0.9903 0.5619 5.8459 ( 1 26 36) 0 0.9903 0.5619 9 16 ( 3157 1k3i_A) ( 4496 1o59_A) 0.8879 0.7269 4.6549 ( 0 14 28) 0 0.8879 0.7269 9 11 ( 3157 1k3i_A) ( 4497 1o59_A) 0.8885 0.8885 3.6448 ( 0 17 28) 0 0.8885 0.8885 9 9 ( 3157 1k3i_A) ( 4599 1od3_A) 0.8881 0.7996 4.3458 ( 0 17 28) 0 0.8881 0.7996 9 10 ( 3157 1k3i_A) ( 4654 1oh4_A) 0.7763 0.4665 6.1000 ( 0 13 21) 0 0.8873 0.5536 9 15 ( 3157 1k3i_A) ( 4929 1p8j_A) 0.7768 0.8733 5.4630 ( 0 12 21) 0 0.7768 0.8733 9 8 ( 3157 1k3i_A) ( 5569 1r64_A) 0.7771 0.6361 4.9724 ( 0 12 21) 0 0.7771 0.6361 9 11 ( 3157 1k3i_A) ( 6050 1umh_A) 0.8863 0.6661 5.9126 ( 0 6 28) 0 0.8863 0.6661 9 12 ( 3157 1k3i_A) ( 6140 1uxz_A) 0.7771 0.5383 5.0831 ( 0 12 21) 0 0.9875 0.6903 9 13 ( 3157 1k3i_A) ( 6347 1xna_A) 0.8879 0.7269 4.6612 ( 0 12 28) 0 0.8879 0.7269 9 11 -------------------------------------------------------------------------------------------------------------------------