------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2872 1jhj_A) ( 387 1bhg_A) 0.4999 0.7768 5.5037 ( 0 11 21) 0 0.4999 0.7768 14 9 ( 2872 1jhj_A) ( 607 1ciy ) 0.6416 0.8936 5.5291 ( 1 24 36) 0 0.6416 0.8936 14 10 ( 2872 1jhj_A) ( 700 1cx1_A) 0.5713 0.7992 5.0342 ( 0 16 28) 0 0.5713 0.7992 14 10 ( 2872 1jhj_A) ( 765 1d7p_M) 0.6302 0.6743 3.3472 ( 2 24 36) 0 0.6302 0.6743 14 13 ( 2872 1jhj_A) ( 1271 1eut ) 0.6419 0.9917 3.9985 ( 1 24 36) 0 0.6419 0.9917 14 9 ( 2872 1jhj_A) ( 1884 1gny_A) 0.6426 0.6920 4.7921 ( 0 24 36) 0 0.6815 0.7234 14 13 ( 2872 1jhj_A) ( 1918 1gqp_A) 0.8474 0.8062 3.4493 ( 5 57 78) 0 0.8474 0.8062 14 15 ( 2872 1jhj_A) ( 1954 1gu3_A) 0.5713 0.8873 5.2305 ( 0 12 28) 0 0.5713 0.8873 14 9 ( 2872 1jhj_A) ( 1959 1gui_A) 0.4999 0.6360 5.6305 ( 0 8 21) 0 0.4999 0.6360 14 11 ( 2872 1jhj_A) ( 1989 1gwm_A) 0.6428 0.8181 2.9820 ( 0 19 36) 0 0.6428 0.8181 14 11 ( 2872 1jhj_A) ( 2116 1h6y_A) 0.4999 0.5832 4.7268 ( 0 8 21) 0 0.4999 0.5832 14 12 ( 2872 1jhj_A) ( 2241 1hn0_A) 0.5674 0.6581 4.7178 ( 1 14 28) 0 0.6141 0.6602 14 12 ( 2872 1jhj_A) ( 2408 1i5p_A) 0.4999 0.5832 4.8598 ( 0 10 21) 0 0.5712 0.6662 14 12 ( 2872 1jhj_A) ( 2762 1j83_A) 0.5710 0.7979 6.4170 ( 0 16 28) 0 0.6423 0.8971 14 10 ( 2872 1jhj_A) ( 2872 1jhj_A) 1.0000 1.0000 0.0000 ( 0 73 91) 0 1.0000 1.0000 14 14 ( 2872 1jhj_A) ( 2886 1ji6_A) 0.5713 0.7994 4.7689 ( 0 17 28) 0 0.5713 0.7994 14 10 ( 2872 1jhj_A) ( 3063 1ju3_A) 0.4041 0.4277 9.5741 ( 2 12 15) 0 0.6045 0.6262 14 13 ( 2872 1jhj_A) ( 3098 1jz7_A) 0.6424 0.5293 5.6055 ( 0 23 36) 0 0.6424 0.5293 14 17 ( 2872 1jhj_A) ( 3124 1k12_A) 0.8567 0.9224 3.4940 ( 1 51 66) 0 0.8567 0.9224 14 13 ( 2872 1jhj_A) ( 3157 1k3i_A) 0.6417 0.9899 4.4223 ( 1 23 36) 0 0.6425 0.9964 14 9 ( 2872 1jhj_A) ( 3170 1k45_A) 0.4997 0.6353 7.2276 ( 0 7 21) 0 0.6401 0.8092 14 11 ( 2872 1jhj_A) ( 3280 1kex_A) 0.7060 0.9588 5.0515 ( 2 31 45) 0 0.7060 0.9588 14 10 ( 2872 1jhj_A) ( 3297 1kgy_A) 0.6414 0.8923 5.8136 ( 1 23 36) 0 0.6414 0.8923 14 10 ( 2872 1jhj_A) ( 3562 1l7l_A) 0.4998 0.9946 6.1594 ( 0 4 21) 0 0.4998 0.9946 14 7 ( 2872 1jhj_A) ( 3680 1lns_A) 0.6315 0.5042 3.9302 ( 4 32 45) 0 0.6384 0.5064 14 19 ( 2872 1jhj_A) ( 4423 1nx9_A) 0.3571 0.3125 7.0397 ( 0 6 10) 0 0.6099 0.5851 14 16 ( 2872 1jhj_A) ( 4496 1o59_A) 0.7127 0.9039 3.9236 ( 1 24 45) 0 0.7127 0.9039 14 11 ( 2872 1jhj_A) ( 4497 1o59_A) 0.6428 0.9993 3.6289 ( 0 25 36) 0 0.6428 0.9993 14 9 ( 2872 1jhj_A) ( 4599 1od3_A) 0.5712 0.7989 5.4800 ( 0 16 28) 0 0.6427 0.8989 14 10 ( 2872 1jhj_A) ( 4654 1oh4_A) 0.6425 0.5997 5.5379 ( 0 25 36) 0 0.6425 0.5997 14 15 ( 2872 1jhj_A) ( 4929 1p8j_A) 0.5713 0.9983 4.5747 ( 0 18 28) 0 0.5713 0.9983 14 8 ( 2872 1jhj_A) ( 5569 1r64_A) 0.5714 0.7271 3.7180 ( 0 19 28) 0 0.5714 0.7271 14 11 ( 2872 1jhj_A) ( 6050 1umh_A) 0.5713 0.6664 4.7403 ( 0 6 28) 0 0.5713 0.6664 14 12 ( 2872 1jhj_A) ( 6140 1uxz_A) 0.7133 0.7678 4.3999 ( 1 28 45) 0 0.7133 0.7678 14 13 ( 2872 1jhj_A) ( 6347 1xna_A) 0.6427 0.8178 4.0048 ( 0 20 36) 0 0.6427 0.8178 14 11 -------------------------------------------------------------------------------------------------------------------------