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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2460 1ich_A)  (   20 1a1w  )     0.7932   0.7932   3.1181 (   1    9   15)   0     0.7932   0.7932    6   6
( 2460 1ich_A)  (  706 1cy5_A)     0.7931   0.7375   3.8726 (   1    9   15)   0     0.7931   0.7375    6   7
( 2460 1ich_A)  (  738 1d2z_A)     0.9994   0.8569   3.5313 (   0   10   15)   0     0.9994   0.8569    6   7
( 2460 1ich_A)  (  739 1d2z_B)     0.9998   0.7499   2.7272 (   0   11   15)   0     0.9998   0.7499    6   8
( 2460 1ich_A)  (  804 1ddf  )     0.9998   0.9998   2.7670 (   0   10   15)   0     0.9998   0.9998    6   6
( 2460 1ich_A)  (  831 1dgn_A)     0.7341   0.7341   3.3006 (   1    8   15)   0     0.7341   0.7341    6   6
( 2460 1ich_A)  ( 1453 1fad_A)     0.8331   0.8331   3.6102 (   0    7   10)   0     0.8331   0.8331    6   6
( 2460 1ich_A)  ( 2460 1ich_A)     1.0000   1.0000   0.0000 (   0   12   15)   0     1.0000   1.0000    6   6
( 2460 1ich_A)  ( 4117 1n3k_A)     0.9996   0.9996   3.1781 (   0   10   15)   0     0.9996   0.9996    6   6
( 2460 1ich_A)  ( 4243 1ngr  )     0.9998   0.9998   2.7349 (   0   11   15)   0     0.9998   0.9998    6   6
( 2460 1ich_A)  ( 5971 1ucp_A)     0.9998   0.9998   2.5833 (   0   10   15)   0     0.9998   0.9998    6   6
( 2460 1ich_A)  ( 6562 3crd  )     0.9984   0.9984   4.5580 (   0    6   15)   0     0.9984   0.9984    6   6
( 2460 1ich_A)  ( 6605 3ygs_P)     0.9993   0.8568   3.7149 (   0    9   15)   0     0.9993   0.8568    6   7

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