------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2482 1ig6_A) ( 288 1b4a_A) 0.5286 0.5286 6.5463 ( 1 6 6) 0 0.5286 0.5286 6 6 ( 2482 1ig6_A) ( 328 1b9m_A) 0.6463 0.3983 14.4626 ( 0 5 6) 0 0.6463 0.3983 6 10 ( 2482 1ig6_A) ( 410 1bja_A) 0.6665 0.5714 3.9920 ( 0 6 6) 0 0.6665 0.5714 6 7 ( 2482 1ig6_A) ( 424 1bm9_A) nil ( 2482 1ig6_A) ( 509 1c20_A) 0.7002 0.6307 2.6755 ( 2 15 15) 0 0.7002 0.6307 6 8 ( 2482 1ig6_A) ( 576 1cf7_A) nil ( 2482 1ig6_A) ( 904 1dp7_P) nil ( 2482 1ig6_A) ( 997 1e17_A) 0.2970 0.2970 8.7022 ( 2 6 6) 1 0.2970 0.2970 6 6 ( 2482 1ig6_A) ( 1461 1fc3_A) 0.7547 0.6030 4.8687 ( 1 10 10) 0 0.7547 0.6076 6 8 ( 2482 1ig6_A) ( 1576 1fnn_A) 0.4667 0.4455 5.1991 ( 1 5 6) 0 0.4667 0.4455 6 7 ( 2482 1ig6_A) ( 1595 1fp1_D) 0.6660 0.4998 6.0009 ( 0 6 6) 0 0.6660 0.4998 6 8 ( 2482 1ig6_A) ( 1597 1fp2_A) 0.6658 0.4998 6.4789 ( 0 6 6) 0 0.6658 0.4998 6 8 ( 2482 1ig6_A) ( 1664 1fzp_B) 0.6619 0.6619 9.9176 ( 0 5 6) 0 0.6619 0.6619 6 6 ( 2482 1ig6_A) ( 1973 1gvj_A) 0.5285 0.3523 7.1281 ( 1 6 6) 0 0.5285 0.3523 6 11 ( 2482 1ig6_A) ( 1999 1gxq_A) 0.5288 0.4161 4.4207 ( 1 6 6) 0 0.5288 0.4161 6 9 ( 2482 1ig6_A) ( 2162 1hbx_G) 0.5288 0.3523 5.2325 ( 1 6 6) 0 0.5288 0.3523 6 11 ( 2482 1ig6_A) ( 2224 1hkq_A) 0.5288 0.3824 4.8892 ( 1 6 6) 0 0.5288 0.3824 6 10 ( 2482 1ig6_A) ( 2278 1hsj_A) 0.7248 0.6562 6.4376 ( 1 9 10) 0 0.7248 0.6562 6 7 ( 2482 1ig6_A) ( 2410 1i5z_A) nil ( 2482 1ig6_A) ( 2482 1ig6_A) 1.0000 1.0000 0.0000 ( 0 15 15) 0 1.0000 1.0000 6 6 ( 2482 1ig6_A) ( 2544 1in4_A) 0.6657 0.5710 6.6396 ( 0 6 6) 0 0.6657 0.5710 6 7 ( 2482 1ig6_A) ( 2703 1j1v_A) 0.8291 0.8291 7.2688 ( 0 10 10) 0 0.8291 0.8291 6 6 ( 2482 1ig6_A) ( 2862 1jgs_A) 0.4666 0.4203 7.2417 ( 1 5 6) 0 0.4666 0.4203 6 8 ( 2482 1ig6_A) ( 2871 1jhg_A) 0.5268 0.5268 10.8389 ( 1 6 6) 0 0.5275 0.5275 6 6 ( 2482 1ig6_A) ( 3237 1ka8_A) nil ( 2482 1ig6_A) ( 3296 1kgs_A) nil ( 2482 1ig6_A) ( 3338 1kkx_A) 0.4665 0.4665 7.6052 ( 1 5 6) 0 0.4665 0.4665 6 6 ( 2482 1ig6_A) ( 3438 1ku9_A) 0.6660 0.4998 5.9599 ( 0 6 6) 0 0.6660 0.4998 6 8 ( 2482 1ig6_A) ( 3604 1ldj_A) nil ( 2482 1ig6_A) ( 3639 1lj9_A) 0.6639 0.4993 8.6102 ( 0 5 6) 0 0.6639 0.4993 6 8 ( 2482 1ig6_A) ( 3681 1lnw_A) 0.6614 0.4987 10.1519 ( 0 5 6) 0 0.6614 0.4987 6 8 ( 2482 1ig6_A) ( 3746 1lva_A) 0.4666 0.4666 6.7818 ( 1 5 6) 0 0.4666 0.4666 6 6 ( 2482 1ig6_A) ( 3748 1lva_A) 0.6660 0.6660 6.0921 ( 0 5 6) 0 0.6660 0.6660 6 6 ( 2482 1ig6_A) ( 3934 1mij_A) 0.3871 0.3871 12.6539 ( 1 4 6) 0 0.3871 0.3871 6 6 ( 2482 1ig6_A) ( 3960 1mkm_A) 0.5288 0.5288 4.6989 ( 1 6 6) 0 0.5288 0.5288 6 6 ( 2482 1ig6_A) ( 4082 1mzb_A) 0.6666 0.4000 3.2996 ( 0 6 6) 0 0.6666 0.4000 6 10 ( 2482 1ig6_A) ( 4537 1o7f_A) 0.5282 0.4159 8.2546 ( 1 6 6) 0 0.5285 0.4160 6 9 ( 2482 1ig6_A) ( 4697 1okr_A) 0.6562 0.4975 12.1306 ( 0 5 6) 0 0.6562 0.4975 6 8 ( 2482 1ig6_A) ( 4714 1omi_A) 0.4659 0.3668 10.0029 ( 1 5 6) 0 0.4659 0.3668 6 10 ( 2482 1ig6_A) ( 4745 1opc ) nil ( 2482 1ig6_A) ( 4840 1oyw_A) 0.4664 0.3670 8.1779 ( 1 5 6) 0 0.4664 0.3670 6 10 ( 2482 1ig6_A) ( 4872 1p2f_A) nil ( 2482 1ig6_A) ( 4894 1p4x_A) 0.6657 0.4998 6.6554 ( 0 6 6) 0 0.6657 0.4998 6 8 ( 2482 1ig6_A) ( 4895 1p4x_A) 0.7242 0.6559 7.0796 ( 1 9 10) 0 0.7242 0.6559 6 7 ( 2482 1ig6_A) ( 4986 1pdn_C) 0.6597 0.4983 10.9303 ( 0 6 6) 0 0.6597 0.4983 6 8 ( 2482 1ig6_A) ( 5074 1pp7_U) 0.6640 0.3998 8.5287 ( 0 5 6) 0 0.6640 0.3998 6 10 ( 2482 1ig6_A) ( 5110 1pue_E) nil ( 2482 1ig6_A) ( 5180 1q1h_A) 0.2488 0.2477 8.8058 ( 2 5 6) 0 0.2488 0.2477 6 7 ( 2482 1ig6_A) ( 5508 1qzz_A) 0.7253 0.7253 5.6087 ( 1 9 10) 0 0.7253 0.7253 6 6 ( 2482 1ig6_A) ( 5612 1rep_C) 0.6660 0.3636 6.0582 ( 0 5 6) 0 0.6660 0.3636 6 11 ( 2482 1ig6_A) ( 5613 1rep_C) 0.6664 0.4999 5.0075 ( 0 5 6) 0 0.6664 0.4999 6 8 ( 2482 1ig6_A) ( 5750 1s29_A) 0.2488 0.2462 6.8464 ( 2 5 6) 0 0.3948 0.3847 6 8 ( 2482 1ig6_A) ( 5764 1s3j_A) 0.5281 0.4159 8.3728 ( 1 6 6) 0 0.5281 0.4159 6 9 ( 2482 1ig6_A) ( 5776 1s7a_A) 0.4667 0.4667 6.0907 ( 1 5 6) 0 0.4667 0.4667 6 6 ( 2482 1ig6_A) ( 5829 1smt_A) 0.4667 0.4455 4.7685 ( 1 5 6) 0 0.4667 0.4455 6 7 ( 2482 1ig6_A) ( 5959 1ub9_A) 0.6662 0.4999 5.4702 ( 0 6 6) 0 0.6662 0.4999 6 8 ( 2482 1ig6_A) ( 5972 1ucr_A) 0.6665 0.6665 3.9502 ( 0 5 6) 0 0.6665 0.6665 6 6 ( 2482 1ig6_A) ( 6025 1uhw_A) 0.4660 0.4660 9.8856 ( 1 5 6) 0 0.4660 0.4660 6 6 ( 2482 1ig6_A) ( 6346 1xgs_A) nil ( 2482 1ig6_A) ( 6450 2fok_A) 0.2488 0.2413 8.0332 ( 2 5 6) 0 0.2488 0.2413 6 10 ( 2482 1ig6_A) ( 6451 2fok_A) 0.2970 0.2727 7.3800 ( 2 6 6) 0 0.2970 0.2727 6 11 ( 2482 1ig6_A) ( 6476 2hts ) 0.1996 0.1993 5.9641 ( 3 6 6) 0 0.1996 0.1993 6 7 ( 2482 1ig6_A) ( 6480 2irf_G) nil 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