------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 877 1dly_A) ( 56 1a6m ) 0.8558 0.7493 5.3024 ( 0 13 15) 0 0.8558 0.7493 7 8 ( 877 1dly_A) ( 147 1all_A) 0.7141 0.6249 3.9055 ( 0 7 10) 0 0.7141 0.6249 7 8 ( 877 1dly_A) ( 148 1all_B) 0.7141 0.6249 3.7579 ( 0 7 10) 0 0.7141 0.6249 7 8 ( 877 1dly_A) ( 197 1ash ) 0.8561 0.7495 4.9631 ( 0 12 15) 0 0.8561 0.7495 7 8 ( 877 1dly_A) ( 259 1b0b ) 0.8559 0.8559 5.1504 ( 0 13 15) 0 0.8559 0.8559 7 7 ( 877 1dly_A) ( 317 1b8d_A) 0.7141 0.5555 3.7528 ( 0 7 10) 0 0.7141 0.5555 7 9 ( 877 1dly_A) ( 586 1cg5_B) 0.8564 0.7496 4.5821 ( 0 13 15) 0 0.8564 0.7496 7 8 ( 877 1dly_A) ( 656 1cqx_A) 0.8540 0.8540 6.5233 ( 0 13 15) 0 0.8540 0.8540 7 7 ( 877 1dly_A) ( 876 1dlw_A) 0.8571 0.8571 0.7398 ( 0 13 15) 0 0.8571 0.8571 7 7 ( 877 1dly_A) ( 877 1dly_A) 1.0000 1.0000 0.0000 ( 0 19 21) 0 1.0000 1.0000 7 7 ( 877 1dly_A) ( 1098 1eca ) 0.8566 0.7497 4.2622 ( 0 13 15) 0 0.8566 0.7497 7 8 ( 877 1dly_A) ( 1282 1ew6_A) 0.8559 0.7494 5.1575 ( 0 12 15) 0 0.8559 0.7494 7 8 ( 877 1dly_A) ( 1503 1fhj_B) 0.6555 0.5923 7.5436 ( 1 9 10) 0 0.7133 0.6245 7 8 ( 877 1dly_A) ( 1795 1gcv_A) 0.8569 0.7499 3.5282 ( 0 13 15) 0 0.9963 0.8731 7 8 ( 877 1dly_A) ( 1796 1gcv_B) 0.8564 0.8564 4.5666 ( 0 13 15) 0 0.8564 0.8564 7 7 ( 877 1dly_A) ( 2126 1h7w_A) 0.4453 0.4202 7.9782 ( 1 5 6) 0 0.4453 0.4202 7 8 ( 877 1dly_A) ( 2142 1h97_A) 0.8068 0.6509 6.3816 ( 1 12 15) 0 0.8068 0.6509 7 9 ( 877 1dly_A) ( 2233 1hlb ) 0.7140 0.7140 4.4159 ( 0 8 10) 0 0.7140 0.7140 7 7 ( 877 1dly_A) ( 2465 1idr_A) 0.8571 0.8571 2.0721 ( 0 13 15) 0 0.8571 0.8571 7 7 ( 877 1dly_A) ( 2580 1ird_A) 0.8570 0.7499 2.9044 ( 0 13 15) 0 0.9798 0.8644 7 8 ( 877 1dly_A) ( 2597 1it2_A) 0.8081 0.8081 5.1112 ( 1 12 15) 0 0.8081 0.8081 7 7 ( 877 1dly_A) ( 2598 1ith_A) 0.8207 0.5934 3.0908 ( 1 13 15) 0 0.8207 0.5934 7 10 ( 877 1dly_A) ( 2815 1jbo_A) 0.8566 0.6665 4.1422 ( 0 12 15) 0 0.8566 0.6665 7 9 ( 877 1dly_A) ( 2816 1jbo_B) 0.7139 0.5555 4.6991 ( 0 7 10) 0 0.7139 0.5555 7 9 ( 877 1dly_A) ( 2956 1jl7_A) 0.8192 0.8192 5.8191 ( 1 13 15) 0 0.8192 0.8192 7 7 ( 877 1dly_A) ( 3283 1kf6_B) 0.8534 0.7481 6.8179 ( 0 13 15) 0 0.8534 0.7481 7 8 ( 877 1dly_A) ( 3406 1kr7_A) 0.8564 0.8564 4.5480 ( 0 13 15) 0 0.8564 0.8564 7 7 ( 877 1dly_A) ( 3899 1mba ) 0.8555 0.7492 5.5335 ( 0 12 15) 0 0.8555 0.7492 7 8 ( 877 1dly_A) ( 4216 1nek_B) 0.5708 0.5708 7.1377 ( 0 5 6) 0 0.5708 0.5708 7 7 ( 877 1dly_A) ( 4241 1ngk_A) 0.8571 0.7500 2.2097 ( 0 12 15) 0 0.8571 0.7500 7 8 ( 877 1dly_A) ( 4675 1oj6_A) 0.6310 0.5771 6.2547 ( 1 8 10) 0 0.8201 0.7301 7 8 ( 877 1dly_A) ( 4759 1or4_A) 0.8563 0.7496 4.6438 ( 0 13 15) 0 0.8563 0.7496 7 8 ( 877 1dly_A) ( 5374 1qla_B) 0.5710 0.4998 6.5256 ( 0 5 6) 0 0.5710 0.4998 7 8 ( 877 1dly_A) ( 6457 2gdm ) 0.8195 0.8195 5.5359 ( 1 13 15) 0 0.8195 0.8195 7 7 ( 877 1dly_A) ( 6595 3sdh_A) 0.7138 0.5554 5.0142 ( 0 7 10) 0 0.7138 0.5554 7 9 -------------------------------------------------------------------------------------------------------------------------