------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2126 1h7w_A) ( 56 1a6m ) 0.2462 0.2462 11.9134 ( 2 5 6) 0 0.2462 0.2462 8 8 ( 2126 1h7w_A) ( 147 1all_A) nil ( 2126 1h7w_A) ( 148 1all_B) nil ( 2126 1h7w_A) ( 197 1ash ) 0.7227 0.7227 6.2773 ( 1 12 15) 0 0.7227 0.7227 8 8 ( 2126 1h7w_A) ( 259 1b0b ) 0.3667 0.3786 10.9802 ( 1 4 6) 0 0.3667 0.3786 8 7 ( 2126 1h7w_A) ( 317 1b8d_A) nil ( 2126 1h7w_A) ( 586 1cg5_B) 0.7290 0.7290 6.6853 ( 1 13 15) 0 0.7290 0.7290 8 8 ( 2126 1h7w_A) ( 656 1cqx_A) 0.2462 0.2477 8.6908 ( 2 5 6) 0 0.2910 0.2945 8 7 ( 2126 1h7w_A) ( 876 1dlw_A) 0.4203 0.4453 7.9287 ( 1 5 6) 0 0.4203 0.4453 8 7 ( 2126 1h7w_A) ( 877 1dly_A) 0.4202 0.4453 7.9782 ( 1 5 6) 0 0.4202 0.4453 8 7 ( 2126 1h7w_A) ( 1098 1eca ) 0.3667 0.3667 11.4453 ( 1 4 6) 0 0.3667 0.3667 8 8 ( 2126 1h7w_A) ( 1282 1ew6_A) 0.2461 0.2461 13.1924 ( 2 5 6) 0 0.2461 0.2461 8 8 ( 2126 1h7w_A) ( 1503 1fhj_B) 0.7288 0.7288 6.8514 ( 1 13 15) 0 0.7288 0.7288 8 8 ( 2126 1h7w_A) ( 1795 1gcv_A) 0.7226 0.7226 6.3980 ( 1 12 15) 0 0.7226 0.7226 8 8 ( 2126 1h7w_A) ( 1796 1gcv_B) 0.2462 0.2477 12.4211 ( 2 5 6) 0 0.2462 0.2477 8 7 ( 2126 1h7w_A) ( 2126 1h7w_A) 1.0000 1.0000 0.0000 ( 0 24 28) 0 1.0000 1.0000 8 8 ( 2126 1h7w_A) ( 2142 1h97_A) 0.7226 0.6509 6.3653 ( 1 12 15) 0 0.7226 0.6509 8 9 ( 2126 1h7w_A) ( 2233 1hlb ) 0.7291 0.8182 6.5638 ( 1 13 15) 0 0.7291 0.8182 8 7 ( 2126 1h7w_A) ( 2465 1idr_A) 0.4203 0.4453 7.4665 ( 1 5 6) 0 0.4203 0.4453 8 7 ( 2126 1h7w_A) ( 2580 1ird_A) 0.4995 0.4995 8.0242 ( 0 5 6) 0 0.4995 0.4995 8 8 ( 2126 1h7w_A) ( 2597 1it2_A) 0.2909 0.2944 11.1993 ( 1 3 6) 0 0.2909 0.2944 8 7 ( 2126 1h7w_A) ( 2598 1ith_A) 0.1987 0.1969 14.4261 ( 3 6 6) 0 0.1987 0.1969 8 10 ( 2126 1h7w_A) ( 2815 1jbo_A) nil ( 2126 1h7w_A) ( 2816 1jbo_B) nil ( 2126 1h7w_A) ( 2956 1jl7_A) 0.1987 0.1992 9.3769 ( 3 6 6) 0 0.1987 0.1992 8 7 ( 2126 1h7w_A) ( 3283 1kf6_B) 0.5000 0.5000 3.1271 ( 0 4 6) 0 0.5000 0.5000 8 8 ( 2126 1h7w_A) ( 3406 1kr7_A) 0.4994 0.5703 8.3306 ( 0 5 6) 0 0.4994 0.5703 8 7 ( 2126 1h7w_A) ( 3899 1mba ) 0.7226 0.7226 6.3809 ( 1 12 15) 0 0.7226 0.7226 8 8 ( 2126 1h7w_A) ( 4216 1nek_B) 0.3655 0.3771 15.9536 ( 1 4 6) 0 0.3655 0.3771 8 7 ( 2126 1h7w_A) ( 4241 1ngk_A) 0.4999 0.4999 5.5657 ( 0 4 6) 0 0.4999 0.4999 8 8 ( 2126 1h7w_A) ( 4675 1oj6_A) 0.7225 0.7225 6.5014 ( 1 12 15) 0 0.7225 0.7225 8 8 ( 2126 1h7w_A) ( 4759 1or4_A) 0.7219 0.7219 7.0882 ( 1 12 15) 0 0.7219 0.7219 8 8 ( 2126 1h7w_A) ( 5374 1qla_B) 0.4999 0.4999 5.1241 ( 0 3 6) 0 0.4999 0.4999 8 8 ( 2126 1h7w_A) ( 6457 2gdm ) 0.4525 0.4909 9.5256 ( 1 6 6) 0 0.4525 0.4909 8 7 ( 2126 1h7w_A) ( 6595 3sdh_A) 0.4199 0.3933 10.3349 ( 1 5 6) 0 0.4200 0.3934 8 9 -------------------------------------------------------------------------------------------------------------------------