------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 147 1all_A) ( 56 1a6m ) 0.7485 0.7485 6.3612 ( 0 11 15) 0 0.7485 0.7485 8 8 ( 147 1all_A) ( 147 1all_A) 1.0000 1.0000 0.0000 ( 0 25 28) 0 1.0000 1.0000 8 8 ( 147 1all_A) ( 148 1all_B) 0.9999 0.9999 1.5683 ( 0 24 28) 0 0.9999 0.9999 8 8 ( 147 1all_A) ( 197 1ash ) 0.7487 0.7487 6.1549 ( 0 11 15) 0 0.7487 0.7487 8 8 ( 147 1all_A) ( 259 1b0b ) 0.7480 0.8532 6.8820 ( 0 11 15) 0 0.7480 0.8532 8 7 ( 147 1all_A) ( 317 1b8d_A) 0.9890 0.8827 3.6067 ( 1 22 28) 0 0.9890 0.8827 8 9 ( 147 1all_A) ( 586 1cg5_B) 0.7490 0.7490 5.8023 ( 0 12 15) 0 0.7490 0.7490 8 8 ( 147 1all_A) ( 656 1cqx_A) 0.7461 0.8496 8.1307 ( 0 11 15) 0 0.7461 0.8496 8 7 ( 147 1all_A) ( 876 1dlw_A) 0.6249 0.7141 3.9253 ( 0 7 10) 0 0.6249 0.7141 8 7 ( 147 1all_A) ( 877 1dly_A) 0.6249 0.7141 3.9055 ( 0 7 10) 0 0.6249 0.7141 8 7 ( 147 1all_A) ( 1098 1eca ) 0.7492 0.7492 5.4415 ( 0 11 15) 0 0.7492 0.7492 8 8 ( 147 1all_A) ( 1282 1ew6_A) 0.7116 0.7116 7.7899 ( 1 11 15) 0 0.7116 0.7116 8 8 ( 147 1all_A) ( 1503 1fhj_B) 0.7487 0.7487 6.1367 ( 0 12 15) 0 0.7487 0.7487 8 8 ( 147 1all_A) ( 1795 1gcv_A) 0.7237 0.7237 3.6773 ( 1 12 15) 0 0.7237 0.7237 8 8 ( 147 1all_A) ( 1796 1gcv_B) 0.7489 0.8550 5.8953 ( 0 12 15) 0 0.7489 0.8550 8 7 ( 147 1all_A) ( 2126 1h7w_A) 0.1987 0.1987 12.4502 ( 2 4 6) 0 0.1987 0.1987 8 8 ( 147 1all_A) ( 2142 1h97_A) 0.7483 0.6657 6.5451 ( 0 11 15) 0 0.7483 0.6657 8 9 ( 147 1all_A) ( 2233 1hlb ) 0.7492 0.8555 5.5246 ( 0 12 15) 0 0.7492 0.8555 8 7 ( 147 1all_A) ( 2465 1idr_A) 0.6249 0.7141 4.0459 ( 0 7 10) 0 0.6249 0.7141 8 7 ( 147 1all_A) ( 2580 1ird_A) 0.7243 0.7243 5.1727 ( 2 17 21) 0 0.7243 0.7243 8 8 ( 147 1all_A) ( 2597 1it2_A) 0.7296 0.8191 5.8854 ( 1 13 15) 0 0.7296 0.8191 8 7 ( 147 1all_A) ( 2598 1ith_A) 0.8623 0.6958 4.6751 ( 1 18 21) 0 0.8623 0.6958 8 10 ( 147 1all_A) ( 2815 1jbo_A) 0.9999 0.8889 1.0502 ( 0 22 28) 0 0.9999 0.8889 8 9 ( 147 1all_A) ( 2816 1jbo_B) 0.9988 0.8882 4.2033 ( 0 23 28) 0 0.9988 0.8882 8 9 ( 147 1all_A) ( 2956 1jl7_A) 0.7485 0.8541 6.4398 ( 0 12 15) 0 0.7485 0.8541 8 7 ( 147 1all_A) ( 3283 1kf6_B) 0.4996 0.4996 7.6802 ( 0 2 6) 0 0.4996 0.4996 8 8 ( 147 1all_A) ( 3406 1kr7_A) 0.6248 0.7138 5.0289 ( 0 8 10) 0 0.6248 0.7138 8 7 ( 147 1all_A) ( 3899 1mba ) 0.7483 0.7483 6.5916 ( 0 11 15) 0 0.7483 0.7483 8 8 ( 147 1all_A) ( 4216 1nek_B) nil ( 147 1all_A) ( 4241 1ngk_A) 0.7130 0.7130 6.4095 ( 1 11 15) 0 0.7130 0.7130 8 8 ( 147 1all_A) ( 4675 1oj6_A) 0.7485 0.7485 6.3647 ( 0 11 15) 0 0.7485 0.7485 8 8 ( 147 1all_A) ( 4759 1or4_A) 0.7492 0.7492 5.3700 ( 0 11 15) 0 0.7492 0.7492 8 8 ( 147 1all_A) ( 5374 1qla_B) 0.6231 0.6231 8.5486 ( 0 6 10) 0 0.6231 0.6231 8 8 ( 147 1all_A) ( 6457 2gdm ) 0.7484 0.8541 6.4583 ( 0 11 15) 0 0.7484 0.8541 8 7 ( 147 1all_A) ( 6595 3sdh_A) 0.7296 0.6550 5.9436 ( 1 13 15) 0 0.7296 0.6550 8 9 -------------------------------------------------------------------------------------------------------------------------