Crossing file for protein chain 1vh6_A derived from PDB id 1vh6, with residue numbers and secondary structures determined by DSSP. Maximum residue index seen: 102. 4 secondary structure lines for helices with at least 3 residues and strands with at least 2 residues: Type 'ID' RESIDUES CENTROID TANGENT START END ---- ----- -------- ------------------------ ------------------------ ------------------------ ------------------------ H 1 H1 3 27 33.403 6.750 -4.047 0.701 0.318 -0.639 19.052 0.238 9.029 46.211 12.562 -15.718 H 2 H2 30 57 29.249 -2.703 -7.801 -0.912 -0.351 0.213 47.326 4.259 -12.015 10.769 -9.819 -3.493 H 3 H3 60 78 11.039 -10.254 15.575 0.232 -0.105 0.967 7.842 -8.803 2.258 14.084 -11.635 28.257 H 4 H4 81 101 17.977 -18.777 9.415 0.316 0.051 -0.948 13.420 -19.509 23.093 22.751 -18.010 -4.914 Crossing matrix using radian threshold 0.50: . . - + . . - - - - . + + - + . Matrix of interline angles: 0.000 2.660 -2.081 0.569 2.660 0.000 -1.540 -2.103 -2.081 -1.540 0.000 2.583 0.569 -2.103 2.583 0.000 Matrix of line centroid separations: 0.000 10.987 34.267 32.723 10.987 0.000 30.578 26.111 34.267 30.578 0.000 12.598 32.723 26.111 12.598 0.000 Matrix of minimum separations between constituent atoms (CA CB CD CD1 CD2 CE CE1 CE2 CE3 CG CG1 CG2 CH2 CZ CZ2 CZ3): 0.000 3.360 8.612 10.174 3.360 0.000 3.437 3.559 8.612 3.437 0.000 3.156 10.174 3.559 3.156 0.000 END ----------------------------------------------------------------------------------------------------------------------------------------------- Copyright (C) 2005 by Michael A. Erdmann. This file was automatically generated on Friday, September 16, 2005. The data contained in this file are approximations, possibly faulty, and are provided "as is", without express or implied warranty of any kind. Please reference: M. A. Erdmann. Protein Similarity from Knot Theory: Geometric Convolution and Line Weavings. Journal of Computational Biology. 12(6), 2005, pp.609-637. -----------------------------------------------------------------------------------------------------------------------------------------------