ó
ÂKUc           @   s2  d  d l  Z  d  d l Z d  d l Z d  d l Z d  d l Z d  d l Z d  d l m Z d  d l	 m
 Z
 d  d l Z d „  Z d „  Z d „  Z d „  Z d „  Z d	 „  Z d
 „  Z d „  Z d „  Z d „  Z d d „ Z d d „ Z d „  Z d „  Z d „  Z d „  Z d „  Z d „  Z d „  Z d „  Z  d S(   iÿÿÿÿN(   t   Munkres(   t   deepcopyc      	   C   s�  xˆt  d ƒ D]z} d GHd } g  } t |  ƒ } t j | ƒ d } x¢ | D]š \ } }	 t }
 xS | D]K \ } } t d t |	 | ƒ t | | ƒ d ƒ } | d k rc t }
 Pqc qc W|
 rÎ | j | |	 f ƒ n  t	 | ƒ | k rJ PqJ qJ Wt
 g  t | t d | d ƒ ƒ D] } | d | d f ^ qƒ } x' | D] \ } }	 | j | |	 f ƒ q2Wx/ | D]' \ } }	 | j | |	 f ƒ s\t ‚ q\Wq Wd S(	   s   tests score estimation
    iè  t   iteri2   g        i    i   iÿÿÿÿN(   t   xranget   listt   randomt   shufflet   Truet   maxt   mint   Falset   appendt   lent   sortedt   addEmptyClusterst   ranget   removet   has_keyt   AssertionError(   t   alldomst	   nodecountt   negdictt   tindt   kt   seldomst   mydomst   tvalt   startt   endt   flagt   start1t   end1t   interlent   blockt   empones(    (    s   lib/HistEvalUtilities.pyt   testVicutEstimate   s.    )Cc      	   C   sœ  t  g  | D] \ } } | | d ^ q
 ƒ } i  i  } }	 x�|  D]y\ } } d }
 x” | D]Œ \ } } t  d t | | ƒ t  | | ƒ d ƒ } | d k rZ |
 | t j t | ƒ | | d ƒ t j t | ƒ | | d ƒ 8}
 qZ qZ Wd } xV | D]N \ } } } | d k rq÷ n  | t  d t | | ƒ t  | | ƒ d ƒ 7} q÷ W| d k r˜|
 | t j t | ƒ | | d ƒ t j t | ƒ | ƒ 8}
 n  |
 d k sªt ‚ |
 | | | f <qA Wg  t t t d „  |  Dƒ ƒ t d g ƒ Bƒ ƒ D] } | d f ^ qî} g  t t t d „  |  Dƒ ƒ t | g ƒ Bƒ ƒ D] } | d f ^ q6} xAt	 j
 t | | ƒ d	 ƒ D]#\ \ } } \ } } | d k r•| n | d } | d k rµ| d n | } | | d
 | k rÕqkn  d }
 x” | D]Œ \ } } t  d t | | ƒ t  | | ƒ d ƒ } | d k râ|
 | t j t | ƒ | | d ƒ t j t | ƒ | | d ƒ 8}
 qâqâWd } xV | D]N \ } } } | d k r qn  | t  d t | | ƒ t  | | ƒ d ƒ 7} qW| d k r |
 | t j t | ƒ | | d ƒ t j t | ƒ | ƒ 8}
 n  |
 d k s2t ‚ |	 j | | f ƒ rf|	 | | f |
 k sft ‚ n  |	 j | | f ƒ sk|
 |	 | | f <qkqkW| |	 f S(   s   est vicut coefs
    i   g        i    t   ec         s   s   |  ] } | d  Vq d S(   i    N(    (   t   .0t   item(    (    s   lib/HistEvalUtilities.pys	   <genexpr>F   s    t   lc         s   s   |  ] } | d  Vq d S(   i   N(    (   R%   R&   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>G   s    t   ri   iú   t   d(   R   R	   t   matht   logt   floatR   R   R   t   sett	   itertoolst   combinationsR   (   R   t	   inferdomst   empdomst   rempartR   R   R   t	   maxneglent   posdictR   t	   curweightR   R   R    t   sym1R&   t   useleftst	   userightst   sym2t   ustartt   uend(    (    s   lib/HistEvalUtilities.pyt   estViCutCoefsExtend'   sT    -)O1CHH5)O1Cc      	   C   s  t  g  | D], \ } } | | f | k r
 | | d ^ q
 ƒ } i  i  } } xÓ |  D]Ë \ } } d }	 x” | D]Œ \ }
 } t  d t | | ƒ t  | |
 ƒ d ƒ } | d k rl |	 | t j t | ƒ | | d ƒ t j t | ƒ | |
 d ƒ 8}	 ql ql W|	 d k st ‚ |	 | | | f <qS Wg  t t t d „  |  Dƒ ƒ t d g ƒ Bƒ ƒ D] } | d f ^ qR} g  t t t d „  |  Dƒ ƒ t | g ƒ Bƒ ƒ D] } | d f ^ qš} x_t	 j
 t | | ƒ d ƒ D]A\ \ } } \ } } | d k rù| n | d } | d k r| d n | } | | d	 | k r9qÏn  d }	 x” | D]Œ \ }
 } t  d t | | ƒ t  | |
 ƒ d ƒ } | d k rF|	 | t j t | ƒ | | d ƒ t j t | ƒ | |
 d ƒ 8}	 qFqFW|	 d k sèt ‚ | j | | f ƒ sÏ|	 | | | f <qÏqÏW| | f S(
   sW   est vicut coefs
    Args:
       alldoms,usedoms,inferdoms,nodecount:
    Returns:
    i   g        i    c         s   s   |  ] } | d  Vq d S(   i    N(    (   R%   R&   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>~   s    R'   c         s   s   |  ] } | d  Vq d S(   i   N(    (   R%   R&   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>   s    R(   i   i   (   R   R	   R*   R+   R,   R   R   R   R-   R.   R/   R   (   R   t   usedomsR0   R   R   R   R3   R4   R   R5   R   R   R    R&   R7   R8   R6   R9   R:   R;   (    (    s   lib/HistEvalUtilities.pyt   estViCutCoefsn   s4    ?)OHH5)Oc          C   ss  t  | ƒ t  t | ƒ ƒ k r* | d k s0 t ‚ | d k rg  t | t d |  d ƒ ƒ D]4 } | d | d f | k rY | d | d f ^ qY } g  | D] \ } } | | d f ^ qš g  | D] \ } } | | d f ^ q¿ } t | | | | |  ƒ \ }	 }
 nm | d k rot g  t | t d |  d ƒ ƒ D] } | d | d f ^ q.ƒ } t | | | |  ƒ \ }	 }
 n  d } | g |  d | g |  d } } i  i  } } |	 j d ƒ rÒ|	 d | d	 <d g | d	 <n  xV d d	 g D]H } |
 j d | f ƒ rß|
 d | f | | <d | d f g | | <qßqßWxÓt	 d
 |  d ƒ D]¾} | d } } |	 j d | f ƒ r¥|	 d | f | k  r¥|	 d | f } d | d f g } q¥n  xt	 d	 | d ƒ D]ú } | j | ƒ r9|	 j | d | f ƒ r9| | |	 | d | f } | | k  r9| } | | | d | d f g } q9n  | j | ƒ r¹|	 j | d | f ƒ r¹| | |	 | d | f } | | k  r³| } | | | d | d f g } q³q¹q¹W| | k rà| | | <t | ƒ | | <n  | d } } |
 j d | f ƒ r@|
 d | f | k  r@|
 d | f } d | d f g } q@n  x‘ t	 d	 | ƒ D]€ } | j | ƒ rP|
 j | d | f ƒ rP| | |
 | d | f } | | k  rÐ| } | | | d | d f g } qÐqPqPW| | k r?| | | <t | ƒ | | <q?q?Wd } x3 t	 d |  d ƒ D] } | j | ƒ r| } qqW| GHt  | ƒ GHd GHx_ t | |  d d !ƒ D]F \ } \ } } } | d k rj| |  | d d	 d k s°t ‚ qjqjWg  | |  D]' \ } } } | d k r¿| | f ^ q¿} t | | |  ƒ } d } | j d |  f ƒ rfg  | |  D]' \ } } } | d k r$| | f ^ q$} t | | |  ƒ } n  t | | ƒ S(   s¦   estimates vi cut score
    Args:
       nodecount:
       alldoms : variable
       inferdoms: fixed
       vitype: extend,normal
    Returns:
       viscore:   
    t   extendt   normali   i    iÿÿÿÿR$   R)   g ÈNgmÁ«Ci   i   s	   done doneg     jø@(   s   extends   normal(   i   i   (   i   i   (   i   i   R)   N(   R   R-   R   R   R   R<   R   R>   R   R   t   NoneR   t	   enumeratet   getVIScoreExtendt
   getVIScoreR	   (    R   R   R0   t   vitypeR!   R1   R   R   R2   R4   R   R=   t   MAXVALt
   posobjvalst
   negobjvalst
   posoptsolst
   negoptsolsR   t   minvalt   optsolt   k1t   curvalt   maxnodet   tnodet   s1t   e1R6   t   symt	   negoptsolt   negvit   posvit	   posoptsol(    (    s   lib/HistEvalUtilities.pyt   estViCutScore�   sŠ    
0WN!C#($((
((
-)88c   	   	      sú   ‡  ‡ f d †  t  t ˆ ƒ ƒ Dƒ } ‡  ‡ f d †  t  t ˆ ƒ ƒ Dƒ } d } x£ t  t ˆ ƒ ƒ D]� } x† t  t ˆ ƒ ƒ D]r } t t t ˆ | ƒ j t ˆ | ƒ ƒ ƒ ƒ ˆ  } | d k r| | | t j | | | | | d ƒ 7} q| q| Wqc W| S(   sj   returns mi score
    Args:
       part1:
       part2:
       nodecount:
    Returns:
       miscore:
    c            s-   i  |  ]# } t  t ˆ | ƒ ƒ ˆ  | “ q S(    (   R,   R   (   R%   t   index(   R   t   part1(    s   lib/HistEvalUtilities.pys
   <dictcomp>í   s   	 c            s-   i  |  ]# } t  t ˆ | ƒ ƒ ˆ  | “ q S(    (   R,   R   (   R%   RY   (   R   t   part2(    s   lib/HistEvalUtilities.pys
   <dictcomp>î   s   	 g        i    g       @(   R   R   R,   R-   t   intersectionR*   R+   (	   RZ   R[   R   t   pdist1t   pdist2t   miscoret   ind1t   ind2t   p(    (   R   RZ   R[   s   lib/HistEvalUtilities.pyt   getMIä   s    	%%35c            sŽ   ‡  ‡ f d †  t  t ˆ ƒ ƒ Dƒ } ‡  ‡ f d †  t  t ˆ ƒ ƒ Dƒ } t | ƒ t | ƒ d t ˆ ˆ ˆ  ƒ } t | ƒ d k  rŠ d S| S(   sj   returns vi score
    Args:
       part1:
       part2:
       nodecount:
    Returns:
       miscore:
    c            s-   i  |  ]# } t  t ˆ | ƒ ƒ ˆ  | “ q S(    (   R,   R   (   R%   RY   (   R   RZ   (    s   lib/HistEvalUtilities.pys
   <dictcomp>   s   	 c            s-   i  |  ]# } t  t ˆ | ƒ ƒ ˆ  | “ q S(    (   R,   R   (   R%   RY   (   R   R[   (    s   lib/HistEvalUtilities.pys
   <dictcomp>  s   	 g       @gü©ñÒMbP?g        (   R   R   t
   getEntropyRc   t   abs(   RZ   R[   R   R]   R^   t   viscore(    (   R   RZ   R[   s   lib/HistEvalUtilities.pyt   getVI÷   s    	%%*c         C   sU   t  g  |  j ƒ  D]8 } |  | d k r d |  | t j |  | d ƒ ^ q ƒ } | S(   sH   gets entropy
    Args:
       probdist:
    Returns:
       entsum:
    i    g      ð¿g       @(   t   sumt   keysR*   R+   (   t   probdistR&   t   entsum(    (    s   lib/HistEvalUtilities.pyRd     s    Qc         C   s  t  g  |  D] \ } } t | | d ƒ ^ q
 d d „  ƒ} d g  } } xV | D]N } t | ƒ t | ƒ } } | | k r“ | j t | | ƒ ƒ n  | d } qO W| t | ƒ k rÖ | j t | t | ƒ d ƒ ƒ n  t r)xJ | D]? } x6 | D]. }	 t t | ƒ t |	 ƒ @ƒ d k sð t ‚ qð Wqã Wn  | j	 | ƒ g  | D] }
 t |
 ƒ d k r=|
 ^ q=} t rxz t
 t | ƒ ƒ D]f } t | | ƒ } xM t
 | d t | ƒ ƒ D]2 } t | | ƒ } t | | @ƒ d k sªt ‚ qªWqzWt t d „  | Dƒ ƒ t | ƒ Aƒ d k st ‚ n  | S(   s;   adds empty clusters
    Args:
       domains,allnodes:
    i   t   keyc         S   s   |  d S(   Ni    (    (   R&   (    (    s   lib/HistEvalUtilities.pyt   <lambda>  s    i    c         s   s"   |  ] } | D] } | Vq q d  S(   N(    (   R%   t   partt   node(    (    s   lib/HistEvalUtilities.pys	   <genexpr>+  s    (   R   R   R	   R   R   R   R   R-   R   R?   R   (   t   domainst   allnodesR   R   RZ   t   curinR[   t   clustt   clust1t   clust2Rn   R`   t   range1Ra   t   range2(    (    s   lib/HistEvalUtilities.pyR     s.    ;#3+ $5c      	   C   sO  t  ƒ  } t |  ƒ } | j | ƒ } d GHx” | D]Œ \ } }	 | d k r| | G|	 G|  | |	 f Gt |  | d d … f ƒ GHn  |	 d k r0 | G|	 G|  | |	 f Gt |  d d … |	 f ƒ GHq0 q0 Wd G| G| GHd }
 xn t t j |  ƒ d ƒ D]S } xJ t t j |  ƒ d ƒ D]/ }	 t |  | |	 f ƒ d	 k r|
 d 7}
 qqWqí Wd
 G|
 GHd } xn t t j |  ƒ d ƒ D]S } xJ t t j |  ƒ d ƒ D]/ }	 t |  | |	 f ƒ d	 k r�| d 7} q�q�WqmWd G| GHg  | D]2 \ } }	 |  | |	 f | k rÔ|  | |	 f ^ qÔ} g  | D]. \ } }	 |  | |	 f d	 k  r| |	 f ^ q} d G| GHg  | D]. \ } }	 |  | |	 f | k rW| |	 f ^ qW} t | ƒ t | | ƒ k s­t	 ‚ | | k rü| j
 g  | D], \ } } | t |  | d d … f ƒ ^ qÆƒ nO | | k  rK| j
 g  | D], \ } } | t |  d d … | f ƒ ^ qƒ n  | S(   sŒ   matches also with mismatch penalty
    Args:
       scoremat,fixedval,penalty:
       truelen,estlen:
    Returns:
       curscores:   
    s   det match infoi   i   Ni   i   s   lens: i    g{®Gáz„?s
   fixcount: s   prematch zercount: s   inside penal: (   i   i   (   i   i   (   R    R   t   computeR	   R   t   npt   shapeRe   R   R   R?   (   t   scorematt   fixedvalt   penaltyt   truelent   estlent   mt	   tscorematt   indexesR`   Ra   t   fixcountt   zercountt	   curscorest   zervalst
   remindicesR   t   eind(    (    s   lib/HistEvalUtilities.pyt   matchPenalized/  s@    	48  	  	?;	;"CCc         C   sI  t  t | ƒ t |  ƒ ƒ t t | ƒ t |  ƒ ƒ } } t j | | f | ƒ } xU t |  ƒ D]G \ } } x8 t | ƒ D]* \ } }	 t | |	 ƒ d | | | f <qu Wq\ Wd }
 d GHx‡ t t j | ƒ d ƒ D]l } xc t t j | ƒ d ƒ D]H } t | | | f ƒ d k rì |  | G| | G| G| GH|
 d 7}
 qì qì WqÌ Wd G|
 GH| S(   s   
    g      à?i    t   workingi   g{®Gáz„?s
   zercount: (	   R	   R   R   Ry   t   fullRB   Re   R   Rz   (   t   truelistt   estlistR|   t   minlent   maxlenR{   t   trindt   trboundt   estindt   estboundR„   R`   Ra   (    (    s   lib/HistEvalUtilities.pyt   getScoreMatY  s    7&  	g       @c         C   s}  d } t  |  d | d | ƒ t  |  d | d | ƒ } } g  } x¶ t | | g ƒ D]¢ \ } } | d k rŒ t |  d ƒ t | d ƒ f n t |  d ƒ t | d ƒ f \ }	 }
 t | | | |	 |
 ƒ } t d „  | Dƒ ƒ } d G| GH| j | ƒ qT Wt | ƒ } i  } x. | D]& } | j | d ƒ | | c d 7<qW| GHd Gt j | ƒ GHd	 Gt j	 | ƒ GHt
 d ƒ t j | ƒ S(
   sÓ   estimates match-based score over boundaries
    Args:
       truebounds,estbounds: dictionary of start and end positions
       penalty: fixedcost per missed domain's mismatch
    Returns: 
       score:   
    I èvH   R   R   i    c         s   s'   |  ] } t  | ƒ d  k  r d Vq d S(   gü©ñÒMbP?i   N(   Re   (   R%   R&   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>y  s    s   inside: i   s   mean: s   std: (   R”   RB   R   R‰   Rh   R?   t
   setdefaultRy   t   meant   stdt   exit(   t
   trueboundst	   estboundsR}   R|   t	   scoremat1t	   scoremat2R…   t   cindt	   cscorematR~   R   t
   tcumscoresR„   t   cumscoret   len2distt   score(    (    s   lib/HistEvalUtilities.pyt   estBoundMatchScorek  s&    5R	
c            sä  d } t  |  | | ƒ ‰  t |  ƒ t | ƒ } } t ˆ  | | | | ƒ } t j t |  ƒ t | ƒ f d t j ƒ‰  xQ t |  ƒ D]C \ } } x4 t | ƒ D]& \ }	 }
 t | |
 ƒ ˆ  | |	 f <q™ Wq€ Wg  } xC t t |  ƒ ƒ D]/ } t	 ˆ  | d d … f ƒ } | j
 | ƒ qà Wd GHd Gt j | ƒ GHd Gt j | ƒ GHd Gt j | ƒ GHi  } x. | D]& } | j | d ƒ | | c d	 7<q[W| GHd
 GHd | d <x! t d ƒ D] } | j
 d ƒ q¦Wt j | ƒ GHt d	 ƒ t ƒ  } t ˆ  ƒ } | j | ƒ } t ‡  f d †  | Dƒ ƒ } d G| GHt d	 ƒ | t t	 t t ƒ t t ƒ ƒ ƒ GHt t ƒ t t ƒ k  rÁt d „  | Dƒ ƒ } t t d t t ƒ ƒ ƒ j | ƒ } | t ‡  f d †  | Dƒ ƒ 7} n  | t t t t ƒ t t ƒ ƒ ƒ S(   sÒ   estimates match-based score over boundaries independently
    Args:
       truebounds,estbounds: start and end positions
       penalty: fixedcost per missed domain's mismatch
    Returns: 
       score:  
    I èvH   t   dtypeNs   infom:s   mean s   median s   std i    i   t   donei
   i2   i   c         3   s%   |  ] \ } } ˆ  | | f Vq d  S(   N(    (   R%   R`   Ra   (   R{   (    s   lib/HistEvalUtilities.pys	   <genexpr>²  s    s   curscore is: c         s   s   |  ] \ } } | Vq d  S(   N(    (   R%   R   Rˆ   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>·  s    c         3   s+   |  ]! } t  ˆ  d  d  … | f ƒ Vq d  S(   N(   R	   (   R%   Rˆ   (   R{   (    s   lib/HistEvalUtilities.pys	   <genexpr>¹  s    (   R”   R   R‰   Ry   t   zerost   float64RB   Re   R   R	   R   R–   t   medianR—   R•   R˜   R    R   Rx   Rh   R,   t   truedomst   estdomsR-   R   t
   differenceR   (   R™   Rš   R}   R|   R~   R   R…   R�   R‘   R’   R“   t   scoresR¢   R¡   t   mylent   indR€   Rœ   R‚   t   curscoret   usedindst   reminds(    (   R{   s   lib/HistEvalUtilities.pyt   estPointMatchScoreˆ  sN    *"

		
$$#c            s²  t  j t |  ƒ t | ƒ f d t  j ƒ‰  xo t |  ƒ D]a \ } } xR t | ƒ D]D \ } } t | d | d ƒ t | d | d ƒ ˆ  | | f <qP Wq7 Wt ƒ  } t ˆ  ƒ } | j | ƒ } t	 ‡  f d †  | Dƒ ƒ }	 t |  ƒ Gt | ƒ GH|	 GH|	 t
 t t |  ƒ t | ƒ ƒ ƒ GHt |  ƒ t | ƒ k  r�t d „  | Dƒ ƒ }
 t t d t | ƒ ƒ ƒ j |
 ƒ } |	 t	 ‡  f d †  | Dƒ ƒ 7}	 n  |	 t
 t t |  ƒ t | ƒ ƒ ƒ S(   sS   estimates match-based score
    Args:
       truedoms,estdoms:
    Returns:   
    R¤   i    i   c         3   s%   |  ] \ } } ˆ  | | f Vq d  S(   N(    (   R%   R`   Ra   (   R{   (    s   lib/HistEvalUtilities.pys	   <genexpr>Ê  s    c         s   s   |  ] \ } } | Vq d  S(   N(    (   R%   R   Rˆ   (    (    s   lib/HistEvalUtilities.pys	   <genexpr>Ï  s    c         3   s+   |  ]! } t  ˆ  d  d  … | f ƒ Vq d  S(   N(   R	   (   R%   Rˆ   (   R{   (    s   lib/HistEvalUtilities.pys	   <genexpr>Ñ  s    (   Ry   R¦   R   R§   RB   Re   R    R   Rx   Rh   R,   R	   R-   R   R«   R   (   R©   Rª   R�   t   trdomR’   t   estdomR€   Rœ   R‚   R¯   R°   R±   (    (   R{   s   lib/HistEvalUtilities.pyt   estMatchScore½  s     *@	$$#c         C   s"  d \ } } } xº | D]² \ } } t  t | | d ƒ ƒ } t } xg |  D]_ \ }	 }
 t  t |	 |
 d ƒ ƒ } | | @} | | B} t | ƒ t | ƒ d k rH t } PqH qH W| r¾ | d 7} q | d 7} q Wt |  ƒ t | ƒ | | } i  } t | ƒ | | | | d <d | d <| | d k rAt | ƒ | | | d <n  d | d <| | d k rvt | ƒ | | | d <n  d	 | d	 | | | | d
 <d \ } } } x° | D]¨ \ } } t  t | | d ƒ ƒ } t } x] |  D]U \ }	 }
 t  t |	 |
 d ƒ ƒ } | | @} t | ƒ t | ƒ d k rÜt } PqÜqÜW| rH| d 7} qª| d 7} qªWt |  ƒ t | ƒ | | } i  } t | ƒ | | | | d <d | d <| | d k rËt | ƒ | | | d <n  d | d <| | d k r t | ƒ | | | d <n  d	 | d	 | | | | d
 <| S(   sw   estimates prediction score list blockwise
    Args:
       truedoms,inferdoms:
    Returns:
       scoredict:     
    i    i   g      à?t   npcg        t   precg      ð?t   seng       @t   f1gš™™™™™é?(   i    i    i    (   i    i    i    (   R-   R   R
   R   R   R,   (   R©   R0   t   tpt   fpt   fnR   R   t   estsetR   t   start2t   end2t   truesett   intersett   unionsett	   scoredict(    (    s   lib/HistEvalUtilities.pyt   estPredScoreBlockListÕ  s`    






c      	   C   sF   | d k r& t  |  | | ƒ } | | S| d	 k rB t |  | | ƒ Sd
 S(   s`   gets score
    Args:
       truedoms,inferdoms:
       nodecount,scoretype:
    Returns:   
    R¶   t   accR·   R¸   t   fprR¹   t   mcct   jaccardt   nviN(   s   npcs   accs   precs   senRÆ   s   f1RÇ   s   jaccard(   t   estPredScoreListRD   (   R©   R0   R   t	   scoretypeRÃ   (    (    s   lib/HistEvalUtilities.pyt   getScore  s
    c      	      sl  t  d ˆ d ƒ ‰  ‡  ‡ f d †  } | |  ƒ } | | ƒ } xò | | g D]ä } xe t j | d ƒ D]Q \ } } t d t | d | d ƒ t | d | d ƒ d ƒ d k sc t ‚ qc Wg  | D] }	 |	 D] }
 |
 ^ qÉ q¿ } t | ƒ d ˆ k r(t | ƒ t t | ƒ ƒ k r(t | ƒ d ˆ k sJ t ‚ qJ Wt | | d ˆ ƒ } | t	 t
 j d ˆ d ƒ ƒ :} | S(   sg   gets VI score extended
    Args:
       truedoms,inferdoms,nodecount:
    Returns:
       viscore:
    i   c            s  g  t  |  ˆ  ƒ D]4 } | d | d f |  k r | d | d f ^ q } g  g  } } xV |  D]N \ } } t | | d ƒ } | j | ƒ | j t ˆ | ˆ | d ƒ ƒ q^ WxV | D]N \ } } t ˆ | ˆ | d ƒ } | j | ƒ | j t | | d ƒ ƒ q· W| j | ƒ | S(   s!   estimates modified parts
        i    iÿÿÿÿi   (   R   R   R   R?   (   R=   R!   t
   empusedomst   sentpartR2   R   R   t   curpart(   Rq   R   (    s   lib/HistEvalUtilities.pyt   getParts4  s    J&i   i    iÿÿÿÿg       @(   R   R.   R/   R   R	   R   R   R-   Rg   R,   R*   R+   (   R©   R0   R   RÐ   t   truepartt   estpartt	   trialpartt   block1t   block2R!   R&   t	   seennodesRf   (    (   Rq   R   s   lib/HistEvalUtilities.pyRC   ,  s    I&T c         C   sc   t  d | d ƒ } t |  | ƒ } t | | ƒ } t | | | ƒ } | t t j | d ƒ ƒ :} | S(   sN   gets VI score
    Args:
       truedoms,inferdoms,nodecount:
    Returns:
    i   g       @(   R   R   Rg   R,   R*   R+   (   R©   R0   R   Rq   RÑ   RÒ   Rf   (    (    s   lib/HistEvalUtilities.pyRD   N  s    c         C   s�  t  |  | ƒ t  | | ƒ } } t j j | | ƒ \ \ } } \ } } t rd G| GHd G| GHd G| GHd G| GHt ƒ  t ƒ  }	 }
 xt t | ƒ D]f \ } } | | } | d k rÎ | d k rÎ |
 j | ƒ q� | d k r� | d k r� |	 j | ƒ q� q� Wd G|	 GHd G|
 GHn  | | | | | k s-t ‚ i  } t	 | ƒ | | | | d	 <t	 | | ƒ | | d
 <d | d <| | d k rœt	 | ƒ | | | d <n  d | d <| | d k rÑt	 | ƒ | | | d <n  t	 | ƒ | | | d <d | d | | | | d <| | d k sG| | d k sG| | d k sG| | d k rTd | d <nE t	 | | | | ƒ t
 j | | | | | | | | ƒ | d <| S(   s‰   estimates prediction score list
    Args:
       truedoms,inferdoms:
       nodecount,scoretype:
    Returns:
       scoredict:     
    s   tp: s   fp: s   fn: s   tn: i   i    s   fpset: s   fnset: RÈ   RÅ   g        R·   g      ð?R¸   RÆ   g       @R¹   RÇ   (   t   getVect   sklearnt   metricst   confusion_matrixR
   R-   RB   t   addR   R,   R*   t   sqrt(   R©   R0   R   t   truevect   infervect   tnR»   R¼   Rº   t   fpsett   fnsetR   t   item1t   item2RÃ   (    (    s   lib/HistEvalUtilities.pyRÊ   \  s@    '				
	

@Ec         C   sD   t  j | d t  j ƒ} x% |  D] \ } } d | | d | +q W| S(   s@   get vector
    Args:
       doms,nodecount:
    Returns:   
    R¤   i   (   Ry   R¦   t   int(   t   domsR   t   sentvecR   R   (    (    s   lib/HistEvalUtilities.pyR×   ˆ  s    c         C   s´  g  |  D] } | D] } | ^ q q g  | D] } | D] } | ^ q4 q* } } d \ } } t  | ƒ d k r›d } xP | D]H }	 t g  | D] }
 t |
 |	 ƒ ^ qˆ ƒ } | d k rx | d 7} qx qx W| t t  | ƒ ƒ :} xA | D]9 }	 t g  | D] }
 t |
 |	 ƒ ^ qñ ƒ } | | 7} qá W| t  | ƒ } | } xA | D]9 }	 t g  | D] } t | |	 ƒ ^ qKƒ } | | 7} q;W| t t  | ƒ t  | ƒ ƒ } n d \ } } | | | f S(   se   est avg distance
    Args:
       truedoms,inferdoms:
    Returns:
       meandist,meandist2:   
    g        i    i   g     ˆÃ@(   g        g        (   g     ˆÃ@g     ˆÃ@(   R   R	   Re   R,   (   R©   R0   t   itemsR&   t   truelocst   estlocst   avgdistt   avgdist2t   awayt   loct   trloct   mindistt   meandistt   estloct	   meandist2(    (    s   lib/HistEvalUtilities.pyt   estAvgDistance”  s(    M)))#(!   t   ost   sysR*   R.   R   t   numpyRy   t   munkresR    t   copyR   t   sklearn.metricsRØ   R#   R<   R>   RX   Rc   Rg   Rd   R   R‰   R”   R£   R²   Rµ   RÄ   RÌ   RC   RD   RÊ   R×   Ró   (    (    (    s   lib/HistEvalUtilities.pyt   <module>   s8   		G	!	U			
		*	5		J		"		,	