Carl Kingsford Carl Kingsford :=


Current Research Interests

We are interested in designing graph and optimization algorithms to extract insight from biological data. In particular, we focus on the following classes of problems:


Here is a collection of lecture slides about bioinformatics and some relevant computer science background.

Webpages for specific recent courses can be found in the Teaching section.

Fall 2014: Algorithms and Advanced Data Structures

Fall 2014: Programming for Scientists

Spring 2014: Algorithms & Data Structures for Scientists

Fall 2013: String Algorithms

Selected Publications

* indicates alphabetized authors. indicates equal contribution.



Biological Network Analysis

Protein Structure (generally older work)

Other Papers