Dana Movshovitz-Attias Ph.D. student, Computer Science Department
Carnegie Mellon University

Information Retrieval

• Dana Movshovitz-Attias and William Cohen, Natural Language Models for Predicting Programming Comments, 2013, To appear in ACL
• Dana Movshovitz-Attias and William Cohen, Alignment-HMM-based Extraction of Abbreviations from Biomedical Text , 2012, BioNLP in NAACL [pdf] [BioNLP presentation] [bibtex]
  [github code (within the second-string package)]
  
  
  

  @InProceedings{movshovitzattias-wcohen:2012:BioNLP2,
    author    = {Movshovitz-Attias, Dana  and  W. Cohen, William},
    title     = {Alignment-HMM-based Extraction of Abbreviations from Biomedical Text},
    booktitle = {{BioNLP}: Proceedings of the 2012 Workshop on Biomedical Natural Language Processing},
    month     = {June},
    year      = {2012},
    address   = {Montr{\'e}al, Canada},
    publisher = {Association for Computational Linguistics},
    pages     = {47--55},
    url       = {http://www.aclweb.org/anthology/W12-2406}
  }
  		

• Dana Movshovitz-Attias and William Cohen, Bootstrapping Biomedical Ontologies for Scientific Text using NELL , 2012, BioNLP in NAACL [pdf] [tech report] [BioNLP presentation] [bibtex]
  
  
  

  @InProceedings{movshovitzattias-wcohen:2012:BioNLP1,
    author    = {Movshovitz-Attias, Dana  and  W. Cohen, William},
    title     = {Bootstrapping Biomedical Ontologies for Scientific Text using NELL},
    booktitle = {{BioNLP}: Proceedings of the 2012 Workshop on Biomedical Natural Language Processing},
    month     = {June},
    year      = {2012},
    address   = {Montr{\'e}al, Canada},
    publisher = {Association for Computational Linguistics},
    pages     = {11--19},
    url       = {http://www.aclweb.org/anthology/W12-2402}
  }
  		

Computational Biology

• Nir London, Barak Raveh, Dana Movshovitz-Attias and Ora Schueler-Furman, "Can Self-Inhibitory Peptides be Derived from the Interfaces of Globular Protein-Protein Interactions?", 2010, Proteins: Structure, Function and Bioinformatics [pubmed] [bibtex]
  
  
  

  @article{london2010can,
    title={Can self-inhibitory peptides be derived from the interfaces of globular protein--protein interactions?},
    author={London, N. and Raveh, B. and Movshovitz-Attias, D. and Schueler-Furman, O.},
    journal={Proteins: Structure, Function, and Bioinformatics},
    volume={78},
    number={15},
    pages={3140--3149},
    year={2010},
    publisher={Wiley Online Library}
  }
  		

• Dana Movshovitz-Attias, Nir London and Ora Schueler-Furman, "On the use of structural templates for high-resolution docking", 2010, Proteins: Structure, Function and Bioinformatics [pubmed] [bibtex]
  
  
  

  @article{movshovitz2010use,
    title={On the use of structural templates for high-resolution docking},
    author={Movshovitz-Attias, D. and London, N. and Schueler-Furman, O.},
    journal={Proteins: Structure, Function, and Bioinformatics},
    volume={78},
    number={8},
    pages={1939--1949},
    year={2010},
    publisher={Wiley Online Library}
  }
  		

  
  Poster: Presented at the 11th Israeli Bioinformatics Symposium at Tel-Aviv University, Israel, 4/2008.
• Nir London, Dana Movshovitz-Attias and Ora Schueler-Furman, "The structural basis of peptide-protein binding strategies", 2010, Structure [pubmed] [bibtex]
  
  
  

  @article{london2010structural,
    title={The structural basis of peptide-protein binding strategies},
    author={London, N. and Movshovitz-Attias, D. and Schueler-Furman, O.},
    journal={Structure},
    volume={18},
    number={2},
    pages={188--199},
    year={2010},
    publisher={Elsevier}
  }
  		

  
  Poster: Presented at the 12th Israeli Bioinformatics Symposium at Weizmann Institute, Israel, 4/2009.